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Chemistry News Archive August 2010


 
Chemistry News August 2010

News of the year 2010 in the fields of chemistry and chemistry-related topics like biochemistry, nantechnology, medicinal chemistry etc.

Main focus: press releases, scientific research results and summaries of chemistry articles, that are published in chemistry journals.

Please send us a eMail to publish your press release!



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Chemistry

 
Chloride Receptor

New Light Switch Chloride Binder

Chemists at Indiana University Bloomington have designed a molecule that binds chloride ions - but can be conveniently compelled to release the ions in the presence of ultraviolet light.

[Image credit: Amar Flood].

 
Sfumato Technique

Mona Lisa?s Secret

X-ray fluorescence spectroscopy unveils Da Vinci?s astounding sfumato technique.

Image:

Non-invasive X-ray fluorescence spectroscopy was used to reveal the sfumato paint layer stacking method that was used by Leonardo da Vinci to paint the faces in seven of his paintings.

[Credit: Angewandte Chemie]

 
Phase-selective gelators

Phase-Selective Gelators Against Oil Pollution

New gelators based on natural sugar compounds bind oil on water surfaces.

[Credit: Angewandte Chemie International Edition]

 
InChI code

InChI Code

InChI makes chemical structural formulae on the Internet visible to all search engines.

 

Dyedrons - A New Class of Dendron-Based Fluorogenic Dyes
Researchers turn up brightness on fluorescent probes; development will open new avenues for research.

 

Laboratory in Microdrops
Credit card-size microflow system handles thousands of experiments.

 
Nano Bathtub

Nano Bathtubs for Single Molecule Microscopy

Some like it hot: How to heat a 'nano bathtub' the JILA way.

Infrared laser light heats the water in "nano bathtub" for JILA research on individual DNA molecules.

[Credit: K. Talbott, NIST]



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Physics - Fundamental Research

 

Molecules Viewed With the X-Ray Vision
Juelich researchers take a look inside molecules.

 

The Magic Nature of Tin
Research may provide clues to formation of heavy elements in exploding stars.

 

Fluorescence Intermittency
Research paper offers breakthrough on blinking molecules phenomenon.

 
Electron Orbits

Electron Transport

Study of electron orbits in multilayer graphene finds unexpected energy gaps.

This graphic shows electrons that move along an equipotential, while those that follow closed equipotentials (as in a potential-energy valley) become localized (right).

[Courtesy of Phillip First]

 
Quantum hole

Attosecond Real-Time Observation of Valence Electron Motion

For the first time ever, physicists from the Laboratory for Attosecond Physics (LAP) at the Max Planck Institute of Quantum Optics have observed what occurs inside an atom from which a single electron has been ejected. They report their findings in Nature.

[Image credit: Dr. Christian Hackenberger, Ludwig-Maximillians University, Munich, Germany].

 

Single Atoms for Detecting Extremely Weak Forces
MPQ-scientists demonstrate that due to synchronisation atoms can be influenced by forces as weak as 5 yoctonewton.

 

Polymer Passage Takes Time
New theory aids researchers studying DNA, protein transport.



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Chemistry & Biology

 

Stress protein Hsp12 provides a cellular survival mechanism never seen before
Unstructured in solution, protein folds to protect cell membranes against leaks and ruptures.

 

Researchers Demonstrate Rocking Movement in the Anti-Stress Protein Hsp90
New approach for cancer medication discovered.

 
Trimethoprim

Trimethoprim Conjugates Make Living Cells Fluorescent

Individual molecules and their dynamics can also be made visible in living cells using conventional fluorophores at a resolution of around 20 nanometers. How this is done is being revealed for the first time by researchers in the journal ?Nature Methods?.

 
Iron electron transfer

Electron Transfer in Biochemical Systems

Help from the dark side: Using dark channel fluorescence, scientists can explain how biochemical substances carry out their function.

Image:

X-ray photon taking electron from the Fe(III) active center to the water mixed orbital in time scale faster than 7 femtoseconds (the core-hole life time of Fe(III).

[Credit: Helmholtz-Zentrum Berlin f? Materialien und Energie, HZB]



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Chemistry & Medicine

 
A self-assembled phenylboronic acid monolayer

Electrodes Reveal Tumors

Direct potentiometric determination of the sialic acid concentration on cell surfaces - a new technique for tumor diagnosis?

Image: A self-assembled phenylboronic acid monolayer on the surface of a gold electrode

[Credit: Angewandte Chemie, DOI 10.1002/anie.201001220]

 

Researchers Discover Cause of Immune System Avoidance of Certain Pathogens
A special set of sugars found on some disease-causing pathogens helps those pathogens fight the body's natural defenses as well as vaccines, say two Iowa State University researchers.

 

Noninvasive Remote-Controlled Release of Drug Molecules
Researchers develop magnetic molecular machines to deliver drugs to unhealthy cells; new nanomaterial could improve therapeutics and imaging in cancer treatment.

 

What Makes a Good Egg and Healthy Embryo?
Discovery about zinc?s role may help in future fertility treatments.



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Chemistry & Geology

 

Sustainable Biochar Takes Some Heat off Global Warming
Charcoal-like substance can offset 1.8 billion metric tons of carbon emissions annually.



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Chemistry & Nanotechnology

 

MRSA Killing Coating
Rensselaer Polytechnic Institute researchers develop coating that safely kills MRSA on contact.

 
LMP Electrodes

Lithium Manganese Phosphate Nanoplates for Li-Ion Battery Cathodes

Paraffin and surfactant oleic acid improve synthesis of lithium manganese phosphate electrodes.

Image:

These tiny flakes of lithium manganese phosphate can serve as electrodes for batteries [Credit: Daiwon Choi, PNNL].



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Chemistry & Materials

 

Fully Reversible Functionalization of Inorganic Nanotubes
Scientists at Johannes Gutenberg University Mainz, Germany have devised a tool which allows fully reversible binding of metal oxides to inorganic nanotubes.

 
Nano sea urchin structures

Nano-Urchins

Empa grows 'sea urchin'-shaped structures. More efficient photocells thanks to nanostructured surfaces.

Image: These are "sea urchins" made of tiny polystyrene balls, with zinc oxide nanowire "spines" are created using a simple electrochemical process.

[Credit: EMPA]



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More News (open access):

 

 

Best way to pour champagne? 'Down the side' wins first scientific test

In a study that may settle a long-standing disagreement over the best way to pour a glass of champagne, scientists in France are reporting that pouring bubbly in an angled, down-the-side way is best for preserving its taste and fizz. The study also reports the first scientific evidence confirming the importance of chilling champagne before serving to enhance its taste, the scientists say. Their report appears in ACS' bi-weekly Journal of Agricultural and Food Chemistry.

G?ard Liger-Belair and colleagues note that tiny bubbles are the essence of fine champagnes and sparkling wines. Past studies indicate that the bubbles - formed during the release of large amounts of dissolved carbon dioxide gas - help transfer the taste, aroma, and mouth-feel of champagne. Scientists long have suspected that the act of pouring a glass of bubbly could have a big impact on gas levels in champagne and its quality. Until now, however, no scientific study had been done.

The scientists studied carbon dioxide loss in champagne using two different pouring methods. One involved pouring champagne straight down the middle of a glass. The other involved pouring champagne down the side of an angled glass. They found that pouring champagne down the side preserved up to twice as much carbon dioxide in champagne than pouring down the middle ? probably because the angled method was gentler. They also showed that cooler champagne temperatures (ideally, 39 degrees Fahrenheit) help reduce carbon dioxide loss.

Journal of Agricultural and Food Chemistry: "On the Losses of Dissolved CO2 during Champagne Serving" [J. Agric. Food Chem., 2010, 58 (15), pp 8768?8775; DOI: 10.1021/jf101239w].

 

Toward safer plastics that lock in potentially harmful plasticizers

Scientists have published the first report on a new way of preventing potentially harmful plasticizers from migrating from one of the most widely used groups of plastics. The advance could lead to a new generation of polyvinyl chloride (PVC) plastics that are safer than those now used in packaging, medical tubing, toys, and other products, they say. Their study is in ACS' Macromolecules, a bi-weekly journal.

Helmut Reinecke and colleagues note that manufacturers add large amounts of plasticizers to PVC to make it flexible and durable. Plasticizers may account for more than one-third of the weight of some PVC products. Phthalates are the mainstay plasticizers. Unfortunately, they migrate to the surface of the plastic over time and escape into the environment. As a result, PVC plastics become less flexible and durable. In addition, people who come into contact with the plastics face possible health risks. The U. S. Consumer Product Safety Commission in 2009 banned use of several phthalate plasticizers for use in manufacture of toys and child care articles.

The scientists describe development of a way to make phthalate permanently bond, or chemically attach to, the internal structure of PVC so that it will not migrate. Laboratory tests showed that the method completely suppressed the migration of plasticizer to the surface of the plastic. "This approach may open new ways to the preparation of flexible PVC with permanent plasticizer effect and zero migration," the article notes.

Macromolecules: "Phthalate Plasticizers Covalently Bound to PVC: Plasticization with Suppressed Migration" [Macromolecules, 2010, 43 (5), pp 2377?2381; DOI: 10.1021/ma902740t].

 

Oil-eating bacteria may determine environmental impact of Gulf oil

The environmental impact of millions of gallons of oil still in the Gulf of Mexico from the Deepwater Horizon incident may depend on microscopic helpers: Bacteria that consume oil and other hydrocarbons and could break down the spilled crude, making it disappear. That's the topic of an article in the current issue of Chemical & Engineering News (C&EN), ACS' weekly newsmagazine.

It points out that the oil-eating bacteria are beneficial in helping to clear away the oil. Their activity, however, could eventually pose risks to the Gulf's ecosystem, particularly in the deep ocean. The oil acts as a huge source of food and could produce bacteria "blooms," or massive population explosions. As the blooms die and decay, they remove oxygen from the Gulf water, jeopardizing the health of fish and other aquatic animals.

The article discusses scientific research underway to shed light on the bacteria's effects. It notes that the oxygen depletion so far is not as serious as the Gulf of Mexico's infamous "dead zone," an 8,000 square mile area - about the size of New Jersey - with oxygen levels too low for fish to survive. The Gulf's oil plumes cause nearly a 35 percent oxygen drop compared to a 90 percent drop in that dead zone.

Chemical & Engineering News: "Microbes to the Rescue" [Volume 88, Number 32pp. 32 - 33; DOI: 10.1021/CEN080210163345].

 

Deathstalker scorpion venom could improve gene therapy for brain cancer

An ingredient in the venom of the "deathstalker" scorpion could help gene therapy become an effective treatment for brain cancer, scientists are reporting. The substance allows therapeutic genes - genes that treat disease - to reach more brain cancer cells than current approaches, according to the study in ACS Nano, a monthly journal.

Miqin Zhang and colleagues note that gene therapy - the delivery of therapeutic genes into diseased cells - shows promise for fighting glioma, the most common and most serious form of brain cancer. But difficulties in getting genes to enter cancer cells and concerns over the safety and potential side effects of substances used to transport these genes have kept the approach from helping patients.

The scientists describe a new approach that could solve these problems. Key ingredients of their gene-delivery system are chlorotoxin, the substance in deathstalker scorpion venom that can slow the spread of brain cancer, and nanoparticles of iron oxide. Each nanoparticle is about 1/50,000th the width of a human hair. In tests on lab mice, the scientists demonstrated that their venom-based nanoparticles can induce nearly twice the amount of gene expression in brain cancer cells as nanoparticles that do not contain the venom ingredient. "These results indicate that this targeted gene delivery system may potentially improve treatment outcome of gene therapy for glioma and other deadly cancers," the article notes.

Nano: "Chlorotoxin Labeled Magnetic Nanovectors for Targeted Gene Delivery to Glioma" [ACS Nano, Article ASAP; DOI: 10.1021/nn1008512].

 

Advance toward earlier detection of melanoma

Melanoma contrast agent

This skin tumor is shown after treatment with a new contrast agent that can improve the visualization of skin cancer cells using an advanced medical imaging device.

Credit: American Chemical Society

Scientists are reporting development of a substance to enhance the visibility of skin cancer cells during scans with an advanced medical imaging system that combines ultrasound and light. The hybrid scanner could enable doctors to detect melanoma, the most serious form of skin cancer, in its earliest and most curable stages, the report in the monthly journal ACS Nano indicates.

Lihong Wang, Younan Xia, and colleagues point out that early diagnosis is key to improving survival in patients with melanoma. The five-year survival rate for melanoma is about 98 percent if detected early but can be as low as 15 percent when detected at an advanced stage. Existing imaging techniques for early detection of melanoma produce low-quality images, can "see" only a fraction of an inch below the skin, and use potentially harmful radioactive materials. A promising new technique called photoacoustic tomography (PAT) can overcome these problems. The system shoots light into tumors, which slightly heats up the cancer cells and produces high frequency sound waves that provide images of the tumor. But the PAT system lacks an optimal contrast agent that can easily enter skin cancer cells and make them visible.

The scientists developed such an agent by attaching a peptide (one of the building blocks of proteins) that targets skin cancer cells to gold "nanocages." These hollow gold nanoparticles have a box-like shape and are barely 1/50,000th the width of a human hair. When injected into mice with skin cancer, the nanocages improved the image quality of the cancer cells by three-fold compared to nanoparticles lacking the peptide. The gold nanocages also show promise as a way to kill skin cancer cells using heat or anti-cancer drugs, they add.

Nano: "In Vivo Molecular Photoacoustic Tomography of Melanomas Targeted by Bioconjugated Gold Nanocages" [ACS Nano, Article ASAP; DOI: 10.1021/nn100736c].

 

Fast forensic test can match suspects' DNA with crime samples in 4 hours

Forensics

Crime-solving may get a boost using a new test that can match suspects' DNA with that of samples from crime scenes in just four hours.

[Credit: iStock]

A newly developed test could make checking DNA from people arrested for crimes with DNA samples from crime scenes stored in forensic databases almost as easy as matching fingerprints. With the test, police could check on whether a person's DNA matches that found at past crime scenes while suspects are still being processed and before a decision on whether to release them on bail. A report on the fast forensic test appeared in the ACS' Analytical Chemistry, a semi-monthly journal.

Andrew Hopwood, Frederic Zenhausern, and colleagues explain that some criminals are arrested, spend less than a day in jail, and then commit crimes while they are out on bail. If police could quickly test the suspects' DNA, to see if their genetic material matches entries in crime databases, they may be able to keep the most dangerous people locked up. But currently, most genetic tests take 24-72 hours, and by the time that the results are back, the suspects often have been released.

To increase the speed of forensic DNA testing, the scientists built a chip that can copy and analyze DNA samples taken from a cotton swab. Forensic technicians can collect DNA from suspects by swabbing their mouth, mixing the sample with a few chemicals, and warming it up. The DNA-testing-lab-on-a-chip does the rest. The entire process takes only four hours at present. Hopwood and Zenhausern teams are already optimizing it and reducing the cycle time down to two hours. Once that is done, police could even double-check their DNA evidence before releasing a suspect.

Analytical Chemistry: "Integrated Microfluidic System for Rapid Forensic DNA Analysis: Sample Collection to DNA Profile" [Anal. Chem., Article ASAP; DOI: 10.1021/ac101355r].

 

Traveling by car increases global temperatures more than by plane, but only in long term

Transport Emissions

Traveling by car contributes to global warming much more than traveling by bus, motorcycle, or train.

[Credit: iStock]

Driving a car increases global temperatures in the long run more than making the same long-distance journey by air according to a new study. However, in the short run travelling by air has a larger adverse climate impact because airplanes strongly affect short-lived warming processes at high altitudes. The study appeared in ACS' Environmental Science & Technology, a semi-weekly journal.

In the study, Jens Borken-Kleefeld and colleagues compare the impacts on global warming of different means of transport. The researchers use, for the first time, a suite of climate chemistry models to consider the climate effects of all long- and short-lived gases, aerosols and cloud effects, not just carbon dioxide, resulting from transport worldwide. They concluded that in the long run the global temperature increase from a car trip will be on average higher than from a plane journey of the same distance. However, in the first years after the journey, air travel increases global temperatures four times more than car travel. Passenger trains and buses cause four to five times less impact than automobile travel for every mile a passenger travels. The findings prove robust despite the scientific uncertainties in understanding the earth's climate system.

"As planes fly at high altitudes, their impact on ozone and clouds is disproportionately high, though short lived. Although the exact magnitude is uncertain, the net effect is a strong, short-term, temperature increase," explains Dr. Jens Borken-Kleefeld, lead author of the study. "Car travel emits more carbon dioxide than air travel per passenger mile. As carbon dioxide remains in the atmosphere longer than the other gases, cars have a more harmful impact on climate change in the long term."

Environmental Science & Technology: "Specific Climate Impact of Passenger and Freight Transport" [Environ. Sci. Technol., 2010, 44 (15), pp 5700?5706; DOI: 10.1021/es9039693].

 

Homes of the poor and the affluent both have high levels of endocrine disruptors

Homes in low-income and affluent communities in California both had similarly high levels of endocrine disruptors, and the levels were higher in indoor air than outdoor air, according to a new study believed to be the first that paired indoor and outdoor air samples for such wide range (104) of these substances. The study appeared in ACS' Environmental Science & Technology, a semi-monthly journal.

Ruthann Rudel and colleagues note concern about the reproductive and other health effects of endocrine disrupting compounds (EDCs), which are found in many products used in the home. Examples include phthalates, which are found in vinyl and other plastics, and polychlorinated biphenyls (PCBs), which are found in older paints, electrical equipment, and building materials. EDCs also are among the ingredients in some pesticides, fragrances, and other materials.

The scientists analyzed indoor and outdoor air samples as well as house dust in homes from two different communities in the San Francisco Bay area for the presence of 104 compounds, including 70 suspected EDCs. The sampling, which took place in 2006, included 40 homes in Richmond, Calif., an urban, industrial, low-income area, and 10 homes in Bolinas, Calif., an affluent, coastal community. Levels were generally higher indoors than outdoors - 32 of the compounds occurred in higher concentrations indoors and only 2 were higher outdoors. The scientists expressed surprise at finding higher concentrations of some phthalates outdoors near urban homes contributing to higher indoor levels as well, but concluded that EDCs "are ubiquitously common across socioeconomic groups."

Environmental Science & Technology: "Semivolatile Endocrine-Disrupting Compounds in Paired Indoor and Outdoor Air in Two Northern California Communities" [Environ. Sci. Technol., Article ASAP; DOI: 10.1021/es100159c].

 

Solving the mystery of bone loss from drug for epilepsy and bipolar disorder

Valproate Bone Loss

A doctor examines an x-ray of a hip joint for signs of bone loss, which can occur following long-term use of a medicine widely used to treat epilepsy, anxiety, and other conditions.

[Credit: iStock]

Scientists are reporting a possible explanation for the bone loss that may occur following long-term use of a medicine widely used to treat epilepsy, bipolar disorder, and other conditions. The drug, valproate, appears to reduce the formation of two key proteins important for bone strength, they said. Their study, which offers a solution to a long-standing mystery, appeared in ACS' monthly Journal of Proteome Research.

Glenn Morris and colleagues point out that use of valproate, first introduced more than 40 years ago for the prevention of seizures in patients with epilepsy, has expanded. Valproate now is prescribed for mood disorders, migraine headache, and spinal muscular atrophy (SMA), a rare genetic disease that causes loss of muscle control and movement. Many SMA patients develop weak bones as a result of the disease itself, making further bone loss from valproate especially undesirable. Doctors have known about the bone-loss side effect, but until now, there has been no molecular explanation.

In an effort to determine why bone loss occurs, the scientists profiled valproate's effects on more than 1,000 proteins in the cells of patients with SMA. They found that valproate reduced production of collagen, the key protein that gives bone its strength, by almost 60 percent. The drug also reduced levels of osteonectin, which binds calcium and helps maintain bone mass, by 28 percent. "The results suggest a possible molecular mechanism for bone loss following long-term exposure to valproate," the article notes.

Journal of Proteome Research: "Valproate and Bone Loss: iTRAQ Proteomics Show that Valproate Reduces Collagens and Osteonectin in SMA Cells" [J. Proteome Res., Article ASAP; DOI: 10.1021/pr1005263].



Chemistry news archive - ordered by month


2010:

Jan

Feb

Mar

Apr

May

Jun

Jul

Aug

Sep

Oct

Nov

Dec

2009:

Jan

Feb

Mar

Apr

May

Jun

Jul

Aug

Sep

Oct

Nov

Dec

2008:

Jan

Feb

Mar

Apr

May

Jun

Jul

Aug

Sep

Oct

Nov

Dec




 


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Update:

March 10, 2011

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http://www.internetchemie.info/news/2010/aug10/index-en.html

Kewords:

Chemistry, news archive, August, 2010

 

 

 

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